All Coding Repeats of Yersinia pestis D106004 plasmid pPCY1
Total Repeats: 103
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017156 | GCC | 2 | 6 | 215 | 220 | 0 % | 0 % | 33.33 % | 66.67 % | 384124300 |
2 | NC_017156 | CGC | 2 | 6 | 229 | 234 | 0 % | 0 % | 33.33 % | 66.67 % | 384124300 |
3 | NC_017156 | CTG | 2 | 6 | 238 | 243 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384124300 |
4 | NC_017156 | TCGC | 2 | 8 | 328 | 335 | 0 % | 25 % | 25 % | 50 % | 384124300 |
5 | NC_017156 | CATT | 2 | 8 | 382 | 389 | 25 % | 50 % | 0 % | 25 % | 384124300 |
6 | NC_017156 | TC | 4 | 8 | 393 | 400 | 0 % | 50 % | 0 % | 50 % | 384124300 |
7 | NC_017156 | CAGGAG | 2 | 12 | 408 | 419 | 33.33 % | 0 % | 50 % | 16.67 % | 384124300 |
8 | NC_017156 | GTTCG | 2 | 10 | 426 | 435 | 0 % | 40 % | 40 % | 20 % | 384124300 |
9 | NC_017156 | GAC | 2 | 6 | 448 | 453 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124300 |
10 | NC_017156 | CTT | 2 | 6 | 605 | 610 | 0 % | 66.67 % | 0 % | 33.33 % | 384124300 |
11 | NC_017156 | TGG | 2 | 6 | 611 | 616 | 0 % | 33.33 % | 66.67 % | 0 % | 384124300 |
12 | NC_017156 | CG | 3 | 6 | 622 | 627 | 0 % | 0 % | 50 % | 50 % | 384124300 |
13 | NC_017156 | TC | 3 | 6 | 736 | 741 | 0 % | 50 % | 0 % | 50 % | 384124300 |
14 | NC_017156 | AAGGT | 2 | 10 | 775 | 784 | 40 % | 20 % | 40 % | 0 % | 384124300 |
15 | NC_017156 | GCTG | 2 | 8 | 895 | 902 | 0 % | 25 % | 50 % | 25 % | 384124300 |
16 | NC_017156 | AGC | 2 | 6 | 970 | 975 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124300 |
17 | NC_017156 | A | 6 | 6 | 1002 | 1007 | 100 % | 0 % | 0 % | 0 % | 384124300 |
18 | NC_017156 | TGA | 2 | 6 | 1025 | 1030 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124300 |
19 | NC_017156 | CAT | 2 | 6 | 1062 | 1067 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384124300 |
20 | NC_017156 | TGA | 2 | 6 | 1107 | 1112 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124300 |
21 | NC_017156 | AGCGC | 2 | 10 | 1175 | 1184 | 20 % | 0 % | 40 % | 40 % | 384124301 |
22 | NC_017156 | GAA | 2 | 6 | 1253 | 1258 | 66.67 % | 0 % | 33.33 % | 0 % | 384124301 |
23 | NC_017156 | TCA | 2 | 6 | 1270 | 1275 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384124301 |
24 | NC_017156 | CGG | 2 | 6 | 1314 | 1319 | 0 % | 0 % | 66.67 % | 33.33 % | 384124301 |
25 | NC_017156 | CTCA | 2 | 8 | 1390 | 1397 | 25 % | 25 % | 0 % | 50 % | 384124301 |
26 | NC_017156 | CAG | 3 | 9 | 1518 | 1526 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124301 |
27 | NC_017156 | ACG | 2 | 6 | 1574 | 1579 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124301 |
28 | NC_017156 | C | 6 | 6 | 1599 | 1604 | 0 % | 0 % | 0 % | 100 % | 384124301 |
29 | NC_017156 | TCA | 2 | 6 | 1611 | 1616 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384124301 |
30 | NC_017156 | TGA | 2 | 6 | 1618 | 1623 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124301 |
31 | NC_017156 | TCAG | 2 | 8 | 1641 | 1648 | 25 % | 25 % | 25 % | 25 % | 384124301 |
32 | NC_017156 | GAA | 2 | 6 | 1649 | 1654 | 66.67 % | 0 % | 33.33 % | 0 % | 384124301 |
33 | NC_017156 | TTC | 2 | 6 | 1664 | 1669 | 0 % | 66.67 % | 0 % | 33.33 % | 384124301 |
34 | NC_017156 | GCA | 2 | 6 | 1760 | 1765 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124301 |
35 | NC_017156 | TCAAA | 2 | 10 | 1813 | 1822 | 60 % | 20 % | 0 % | 20 % | 384124301 |
36 | NC_017156 | CAGA | 2 | 8 | 1840 | 1847 | 50 % | 0 % | 25 % | 25 % | 384124301 |
37 | NC_017156 | A | 6 | 6 | 3492 | 3497 | 100 % | 0 % | 0 % | 0 % | 384124302 |
38 | NC_017156 | C | 6 | 6 | 3548 | 3553 | 0 % | 0 % | 0 % | 100 % | 384124302 |
39 | NC_017156 | C | 6 | 6 | 3629 | 3634 | 0 % | 0 % | 0 % | 100 % | 384124302 |
40 | NC_017156 | TG | 3 | 6 | 3782 | 3787 | 0 % | 50 % | 50 % | 0 % | 384124302 |
41 | NC_017156 | C | 6 | 6 | 3794 | 3799 | 0 % | 0 % | 0 % | 100 % | 384124302 |
42 | NC_017156 | ATC | 2 | 6 | 4393 | 4398 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384124303 |
43 | NC_017156 | A | 7 | 7 | 4413 | 4419 | 100 % | 0 % | 0 % | 0 % | 384124303 |
44 | NC_017156 | A | 6 | 6 | 4550 | 4555 | 100 % | 0 % | 0 % | 0 % | 384124303 |
45 | NC_017156 | GAT | 2 | 6 | 4588 | 4593 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124303 |
46 | NC_017156 | AG | 3 | 6 | 4617 | 4622 | 50 % | 0 % | 50 % | 0 % | 384124303 |
47 | NC_017156 | CTGT | 2 | 8 | 4632 | 4639 | 0 % | 50 % | 25 % | 25 % | 384124303 |
48 | NC_017156 | TC | 3 | 6 | 4650 | 4655 | 0 % | 50 % | 0 % | 50 % | 384124303 |
49 | NC_017156 | TAA | 2 | 6 | 4656 | 4661 | 66.67 % | 33.33 % | 0 % | 0 % | 384124303 |
50 | NC_017156 | A | 7 | 7 | 4699 | 4705 | 100 % | 0 % | 0 % | 0 % | 384124303 |
51 | NC_017156 | TAG | 2 | 6 | 4725 | 4730 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124303 |
52 | NC_017156 | GAAA | 2 | 8 | 4732 | 4739 | 75 % | 0 % | 25 % | 0 % | 384124303 |
53 | NC_017156 | TAT | 2 | 6 | 4770 | 4775 | 33.33 % | 66.67 % | 0 % | 0 % | 384124303 |
54 | NC_017156 | ATT | 2 | 6 | 4795 | 4800 | 33.33 % | 66.67 % | 0 % | 0 % | 384124303 |
55 | NC_017156 | CAA | 2 | 6 | 4890 | 4895 | 66.67 % | 0 % | 0 % | 33.33 % | 384124304 |
56 | NC_017156 | TAT | 2 | 6 | 4896 | 4901 | 33.33 % | 66.67 % | 0 % | 0 % | 384124304 |
57 | NC_017156 | CCT | 2 | 6 | 5172 | 5177 | 0 % | 33.33 % | 0 % | 66.67 % | 384124304 |
58 | NC_017156 | ATA | 2 | 6 | 5191 | 5196 | 66.67 % | 33.33 % | 0 % | 0 % | 384124304 |
59 | NC_017156 | CTA | 2 | 6 | 5315 | 5320 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384124304 |
60 | NC_017156 | CAA | 2 | 6 | 5388 | 5393 | 66.67 % | 0 % | 0 % | 33.33 % | 384124304 |
61 | NC_017156 | ACG | 2 | 6 | 5404 | 5409 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124304 |
62 | NC_017156 | TTA | 2 | 6 | 5483 | 5488 | 33.33 % | 66.67 % | 0 % | 0 % | 384124304 |
63 | NC_017156 | TCTT | 2 | 8 | 5507 | 5514 | 0 % | 75 % | 0 % | 25 % | 384124304 |
64 | NC_017156 | ACC | 2 | 6 | 5854 | 5859 | 33.33 % | 0 % | 0 % | 66.67 % | 384124304 |
65 | NC_017156 | GGAAG | 2 | 10 | 6051 | 6060 | 40 % | 0 % | 60 % | 0 % | 384124305 |
66 | NC_017156 | GCA | 2 | 6 | 6065 | 6070 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124305 |
67 | NC_017156 | A | 7 | 7 | 6096 | 6102 | 100 % | 0 % | 0 % | 0 % | 384124305 |
68 | NC_017156 | CAAAA | 2 | 10 | 6123 | 6132 | 80 % | 0 % | 0 % | 20 % | 384124305 |
69 | NC_017156 | CTG | 2 | 6 | 6169 | 6174 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384124305 |
70 | NC_017156 | GAA | 2 | 6 | 6199 | 6204 | 66.67 % | 0 % | 33.33 % | 0 % | 384124305 |
71 | NC_017156 | AC | 3 | 6 | 6239 | 6244 | 50 % | 0 % | 0 % | 50 % | 384124305 |
72 | NC_017156 | A | 7 | 7 | 6366 | 6372 | 100 % | 0 % | 0 % | 0 % | 384124305 |
73 | NC_017156 | GAA | 2 | 6 | 6668 | 6673 | 66.67 % | 0 % | 33.33 % | 0 % | 384124306 |
74 | NC_017156 | GCA | 2 | 6 | 6723 | 6728 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124306 |
75 | NC_017156 | AT | 3 | 6 | 6748 | 6753 | 50 % | 50 % | 0 % | 0 % | 384124306 |
76 | NC_017156 | GAA | 2 | 6 | 6835 | 6840 | 66.67 % | 0 % | 33.33 % | 0 % | 384124306 |
77 | NC_017156 | AT | 3 | 6 | 6892 | 6897 | 50 % | 50 % | 0 % | 0 % | 384124306 |
78 | NC_017156 | ATGA | 2 | 8 | 6987 | 6994 | 50 % | 25 % | 25 % | 0 % | 384124306 |
79 | NC_017156 | AATC | 2 | 8 | 6996 | 7003 | 50 % | 25 % | 0 % | 25 % | 384124306 |
80 | NC_017156 | CTCAT | 2 | 10 | 7019 | 7028 | 20 % | 40 % | 0 % | 40 % | 384124306 |
81 | NC_017156 | CAG | 2 | 6 | 7117 | 7122 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124306 |
82 | NC_017156 | GGT | 2 | 6 | 7158 | 7163 | 0 % | 33.33 % | 66.67 % | 0 % | 384124306 |
83 | NC_017156 | TAA | 2 | 6 | 7175 | 7180 | 66.67 % | 33.33 % | 0 % | 0 % | 384124306 |
84 | NC_017156 | AT | 3 | 6 | 7250 | 7255 | 50 % | 50 % | 0 % | 0 % | 384124306 |
85 | NC_017156 | ATT | 2 | 6 | 7301 | 7306 | 33.33 % | 66.67 % | 0 % | 0 % | 384124306 |
86 | NC_017156 | ATG | 2 | 6 | 7339 | 7344 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124306 |
87 | NC_017156 | GA | 3 | 6 | 7355 | 7360 | 50 % | 0 % | 50 % | 0 % | 384124306 |
88 | NC_017156 | TTA | 2 | 6 | 7394 | 7399 | 33.33 % | 66.67 % | 0 % | 0 % | 384124306 |
89 | NC_017156 | TACA | 2 | 8 | 7460 | 7467 | 50 % | 25 % | 0 % | 25 % | 384124306 |
90 | NC_017156 | ATG | 2 | 6 | 7474 | 7479 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124306 |
91 | NC_017156 | AGG | 2 | 6 | 7487 | 7492 | 33.33 % | 0 % | 66.67 % | 0 % | 384124306 |
92 | NC_017156 | TGC | 2 | 6 | 7544 | 7549 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384124306 |
93 | NC_017156 | CGG | 2 | 6 | 7579 | 7584 | 0 % | 0 % | 66.67 % | 33.33 % | 384124306 |
94 | NC_017156 | TCCT | 2 | 8 | 7811 | 7818 | 0 % | 50 % | 0 % | 50 % | 384124307 |
95 | NC_017156 | GCT | 2 | 6 | 7904 | 7909 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384124307 |
96 | NC_017156 | CTG | 2 | 6 | 7922 | 7927 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384124307 |
97 | NC_017156 | TTC | 2 | 6 | 7977 | 7982 | 0 % | 66.67 % | 0 % | 33.33 % | 384124307 |
98 | NC_017156 | CAT | 2 | 6 | 7986 | 7991 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384124307 |
99 | NC_017156 | ATC | 2 | 6 | 8011 | 8016 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384124307 |
100 | NC_017156 | GT | 3 | 6 | 8104 | 8109 | 0 % | 50 % | 50 % | 0 % | 384124308 |
101 | NC_017156 | CGA | 2 | 6 | 8205 | 8210 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384124308 |
102 | NC_017156 | TCT | 2 | 6 | 8382 | 8387 | 0 % | 66.67 % | 0 % | 33.33 % | 384124308 |
103 | NC_017156 | GTC | 2 | 6 | 8402 | 8407 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384124308 |